GO:0006360 transcription by RNA polymerase I

41 hsa genes in this database.
19 mmu genes in this database.
26 rno genes in this database.
4 gga genes in this database.
15 dre genes in this database.
17 dme genes in this database.
8 cel genes in this database.
39 sce genes in this database.
29 spo genes in this database.

[QuickGO]

term: transcription by RNA polymerase I
goid: GO:0006360

Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
hsa CCNH cyclin H 902
hsa CDK7 cyclin dependent kinase 7 1022
hsa ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit 2068
hsa ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit 2071
hsa ERCC6 ERCC excision repair 6, chromatin remodeling factor 2074
hsa GTF2H1 general transcription factor IIH subunit 1 2965 IBA
hsa GTF2H2 general transcription factor IIH subunit 2 2966
hsa GTF2H3 general transcription factor IIH subunit 3 2967
hsa GTF2H4 general transcription factor IIH subunit 4 2968
hsa MNAT1 MNAT1 component of CDK activating kinase 4331
hsa POLR2E RNA polymerase II, I and III subunit E 5434
hsa POLR2F RNA polymerase II, I and III subunit F 5435
hsa POLR2H RNA polymerase II, I and III subunit H 5437
hsa POLR2K RNA polymerase II, I and III subunit K 5440
hsa POLR2L RNA polymerase II, I and III subunit L 5441 IBA
hsa MAPK3 mitogen-activated protein kinase 3 5595
hsa SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 6597
hsa SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 6598
hsa TAF1 TATA-box binding protein associated factor 1 6872
hsa TBP TATA-box binding protein 6908
hsa TCOF1 treacle ribosome biogenesis factor 1 6949
hsa TTF1 transcription termination factor 1 7270
hsa UBTF upstream binding transcription factor 7343 IMP
hsa TAF1C TATA-box binding protein associated factor, RNA polymerase I subunit C 9013 TAS
hsa TAF1B TATA-box binding protein associated factor, RNA polymerase I subunit B 9014
hsa TAF1A TATA-box binding protein associated factor, RNA polymerase I subunit A 9015 TAS
hsa POLR1C RNA polymerase I and III subunit C 9533 TAS
hsa POLR1G RNA polymerase I subunit G 10849
hsa BAZ2A bromodomain adjacent to zinc finger domain 2A 11176
hsa POLR1A RNA polymerase I subunit A 25885
hsa POLR1H RNA polymerase I subunit H 30834
hsa RRN3 RRN3 homolog, RNA polymerase I transcription factor 54700
hsa PIH1D1 PIH1 domain containing 1 55011
hsa POLR1E RNA polymerase I subunit E 64425
hsa TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 79101
hsa POLR1B RNA polymerase I subunit B 84172
hsa POLR1F RNA polymerase I subunit F 221830
hsa CAVIN1 caveolae associated protein 1 284119
hsa GTF2H5 general transcription factor IIH subunit 5 404672
hsa RRN3P2 RRN3 pseudogene 2 653390
hsa RRN3P1 RRN3 pseudogene 1 730092
mmu Cebpa CCAAT/enhancer binding protein (C/EBP), alpha 12606 ISO
mmu Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 13871
mmu Ercc3 excision repair cross-complementing rodent repair deficiency, complementation group 3 13872
mmu Gtf2h1 general transcription factor II H, polypeptide 1 14884 IBA
mmu Lipe lipase, hormone sensitive 16890
mmu Cavin1 caveolae associated 1 19285
mmu Taf1a TATA-box binding protein associated factor, RNA polymerase I, A 21339 TAS
mmu Taf1b TATA-box binding protein associated factor, RNA polymerase I, B 21340 TAS
mmu Taf1c TATA-box binding protein associated factor, RNA polymerase I, C 21341 TAS
mmu Ubtf upstream binding transcription factor, RNA polymerase I 21429 ISO
mmu Tcof1 treacle ribosome biogenesis factor 1 21453
mmu Ttf1 transcription termination factor, RNA polymerase I 22130
mmu Polr1e polymerase (RNA) I polypeptide E 64424
mmu Polr1h RNA polymerase I subunit H 66136
mmu Gtf2h5 general transcription factor IIH, polypeptide 5 66467
mmu Polr2l polymerase (RNA) II (DNA directed) polypeptide L 66491 IBA
mmu Cd3eap CD3E antigen, epsilon polypeptide associated protein 70333 IEA
mmu Rrn3 RRN3 RNA polymerase I transcription factor homolog (yeast) 106298
mmu Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 319955
rno Cebpa CCAAT/enhancer binding protein alpha 24252 ISO,ISS
rno Lipe lipase E, hormone sensitive type 25330
rno Ubtf upstream binding transcription factor 25574 ISO
rno Polr2f RNA polymerase II, I and III subunit F 83503 TAS
rno Polr1a RNA polymerase I subunit A 83581 IEA
rno Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 171379
rno Cavin1 caveolae associated protein 1 287710
rno Tcof1 treacle ribosome biogenesis factor 1 291571
rno Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit 291703
rno Pih1d1 PIH1 domain containing 1 292898
rno Polr1c RNA polymerase I and III subunit C 301246 IEA
rno Baz2a bromodomain adjacent to zinc finger domain, 2A 304601
rno Rrn3 RRN3 homolog, RNA polymerase I transcription factor 304714
rno Ercc6 ERCC excision repair 6, chromatin remodeling factor 306274
rno Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit 308415
rno Polr1e RNA polymerase I subunit E 313245
rno Taf1 TATA-box binding protein associated factor 1 317256
rno Taf1a TATA-box binding protein associated factor, RNA polymerase I subunit A 360893 IEA
rno Taf1c TATA-box binding protein associated factor, RNA polymerase 1 subunit C 361420
rno Gtf2h1 general transcription factor IIH subunit 1 361580 IBA
rno Polr1h RNA polymerase I subunit H 361784
rno Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 361825
rno Ttf1 transcription termination factor 1 499766
rno Gtf2h5 general transcription factor IIH subunit 5 502227
rno Polr1g RNA polymerase I subunit G 680493 IEA
rno Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B 690450
gga TAF1B TATA-box binding protein associated factor, RNA polymerase I subunit B 421933
gga SPTY2D1 SPT2 chromatin protein domain containing 1 423083 IMP
gga SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 769489
gga GTF2H5 general transcription factor IIH subunit 5 769754
dre pho phoenix 334003 IEA
dre ttf1.1 transcription termination factor 1, tandem duplicate 1 334973
dre taf1c TATA-box binding protein associated factor, RNA polymerase I subunit C 336342 IEA
dre gtf2h1 general transcription factor IIH, polypeptide 1 447857 IBA
dre taf1b TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B 449647 IEA
dre ttf1.6 transcription termination factor 1, tandem duplicate 6 449954
dre polr1h RNA polymerase I subunit H 541428
dre polr2l RNA polymerase II, I and III subunit L 553705 IBA
dre polr1e RNA polymerase I subunit E 553733
dre cavin1a caveolae associated protein 1a 557070
dre rrn3 RRN3 homolog, RNA polymerase I transcription factor 558718
dre cavin1b caveolae associated protein 1b 561082
dre taf1a TATA box binding protein (TBP)-associated factor, RNA polymerase I, A 567105 IEA
dre polr1g RNA polymerase I subunit G 792693 IEA
dre ttf1.2 transcription termination factor 1, tandem duplicate 2 100334190
dme RpI135 RNA polymerase I 135kD subunit 33210 ISS
dme CG3756 uncharacterized protein 33712 ISS
dme CG13773 uncharacterized protein 33963 ISS
dme l(2)37Cg lethal (2) 37Cg 35196 ISS
dme Tif-IA Tif-IA 35454
dme udd under-developed 35781
dme Rpb5 Rpb5 36160 ISS
dme Tfb1 Transcription factor B1 36598 IBA
dme RpI1 RNA polymerase I subunit 36617 ISS
dme TAF1C-like TATA box-binding protein-associated factor RNA polymerase I subunit C-like 37450
dme Rpb8 Rpb8 40415 ISS
dme TAF1B TATA box-binding protein-associated factor RNA polymerase I subunit B 41242
dme CG18600 uncharacterized protein 42201
dme RpI12 RpI12 42563 ISS
dme Rpb10 Rpb10 42942 IBA,ISS
dme RpII18 RNA polymerase II 18kD subunit 48312 ISS
dme Rpb12 Rpb12 5740790 ISS
cel rpb-10 DNA-directed RNA polymerases I, II, and III subunit RPABC5 171763 IBA
cel F23H11.2 TATA box-binding protein-associated factor RNA polymerase I subunit B 175251 IEA
cel C36E8.1 Uncharacterized protein 175517
cel gtf-2H1 General Transcription Factor homolog 176838 IBA
cel rpac-40 RPOLD domain-containing protein 178823 IEA
cel rpoa-12 DNA-directed RNA polymerase subunit 182648
cel dao-5 Nucleolar protein dao-5 266845
cel rpoa-49 RNA POlymerase I (A) subunit 24104475
sce GRC3 polynucleotide 5'-hydroxyl-kinase 850624
sce RRN5 Rrn5p 850832
sce CDC73 Cdc73p 851136
sce KIN28 TFIIH complex serine/threonine-protein kinase subunit KIN28 851450 IMP
sce NSI1 Nsi1p 851590
sce RPA14 DNA-directed RNA polymerase I subunit RPA14 851734 IDA
sce TFB1 TFIIH/NER complex subunit TFB1 851906 IBA,IMP
sce RRN10 Rrn10p 852256 IEA
sce RRN6 Rrn6p 852269
sce REB1 DNA-binding protein REB1 852338
sce RPB5 DNA-directed RNA polymerase core subunit RPB5 852451 IDA,IMP
sce ISW1 chromatin-remodeling ATPase ISW1 852547
sce PAF1 Paf1p 852582 IGI,IMP
sce DST1 transcription elongation factor DST1 852839
sce SPT4 transcription elongation factor SPT4 852955 IEA
sce RPA34 DNA-directed RNA polymerase I subunit RPA34 853293 IEA
sce RRN7 Rrn7p 853428 IEA
sce RPA12 DNA-directed RNA polymerase I core subunit RPA12 853526 IDA
sce TOR1 phosphatidylinositol kinase-related protein kinase TOR1 853529
sce RRN3 rDNA-binding RNA polymerase I transcriptional factor 853734
sce CTR9 Ctr9p 854020 IGI
sce RPB10 DNA-directed RNA polymerase core subunit RPB10 854385 IBA,IDA,IGI,IMP
sce RPB8 DNA-directed RNA polymerase core subunit RPB8 854399 IDA,IPI
sce UAF30 Uaf30p 854470
sce RPA43 DNA-directed RNA polymerase I subunit RPA43 854518 IDA
sce RPA190 DNA-directed RNA polymerase I core subunit RPA190 854519 IDA
sce GTR1 Rag GTPase GTR1 854918 IMP,IPI
sce RRN11 Rrn11p 854964
sce TRI1 Tri1p 855273
sce RRN9 Rrn9p 855312
sce RPA49 DNA-directed RNA polymerase I subunit RPA49 855473 IDA
sce RPC19 DNA-directed RNA polymerase core subunit RPC19 855609 IDA
sce MOT1 DNA-binding ATPase 856023
sce RPA135 DNA-directed RNA polymerase I core subunit RPA135 856119 IDA
sce RPC40 DNA-directed RNA polymerase core subunit RPC40 856226 IDA
sce RPO26 DNA-directed RNA polymerase core subunit RPO26 856317 IDA
sce RPC10 DNA-directed RNA polymerase core subunit RPC10 856547 IDA,IMP
sce SPT15 TATA-binding protein 856891
sce CHD1 chromatin-remodeling ATPase CHD1 856911
spo rpa12 DNA-directed RNA polymerase complex I subunit Rpa12 2538906
spo rpb6 DNA-directed RNA polymerase subunit Rpb6 2539083 IC
spo spp27 RNA polymerase I upstream activation factor complex subunit Spp27 2539310
spo rpc40 DNA-directed RNA polymerase I and III subunit Rpc40 2539663 IGI
spo ker1 DNA-directed RNA polymerase I complex subunit Ker1 2539675 IGI
spo rpa34 putative DNA-directed RNA polymerase I complex subunit Rpa34 2539699 ISS
spo rpb8 DNA-directed RNA polymerase subunit Rpb8 2539794 TAS
spo acr1 upstream activation factor complex subunit Acr1 2539830 ISO
spo pol5 DNA polymerase phi 2539834
spo reb1 RNA polymerase I transcription termination factor Reb1 2539930
spo rrn7 RNA polymerase I upstream activation factor complex subunit Rrn7 2540236
spo SPBC28F2.11 HMG box protein 2540337 IMP
spo rpc10 DNA-directed RNA polymerase subunit Rpc10 2540793 IGI
spo nuc1 DNA-directed RNA polymerase I complex large subunit Nuc1 2540873 ISO
spo rrn6 putative RNA polymerase I transcription factor subunit Rrn6 2540951
spo rpa43 DNA-directed RNA polymerase I complex subunit Rpa43 2540989
spo rrn11 putative RNA polymerase I transcription factor subunit Rrn11 2541184
spo rpa2 DNA-directed RNA polymerase I complex subunit Rpa2 2541280 ISO
spo tbp1 TATA-binding protein (TBP) 2541582
spo rrn10 RNA polymerase I upstream activation factor complex subunit Rrn10 2541835
spo rpb5 DNA-directed RNA polymerase subunit Rpb5 2541910 IGI
spo rpa49 putative DNA-directed RNA polymerase I complex subunit Rpa49 2541914
spo tpr1 RNA polymerase II-associated Paf1 complex subunit Tpr1 2542077
spo rpb10 DNA-directed RNA polymerase subunit Rpb10 2542233 IBA,IGI
spo tfb1 putative transcription factor TFIIH complex subunit Tfb1 2542336 IBA
spo rrn3 ribosomal DNA (rDNA) transcription factor Rrn3 2542511
spo eta2 Myb family protein Eta2 2542575
spo rrn5 RNA polymerase I upstream activation factor complex subunit Rrn5 2542734
spo rpc19 DNA-directed RNA polymerase I and III subunit Rpc19 2542799 IGI


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