GO:0000956 nuclear-transcribed mRNA catabolic process

196 hsa genes in this database.
97 mmu genes in this database.
98 rno genes in this database.
9 gga genes in this database.
72 dre genes in this database.
63 dme genes in this database.
73 cel genes in this database.
113 sce genes in this database.
100 spo genes in this database.

[QuickGO]

term: nuclear-transcribed mRNA catabolic process
goid: GO:0000956


Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
hsa ATM ATM serine/threonine kinase 472
hsa ZFP36L1 ZFP36 ring finger protein like 1 677
hsa ZFP36L2 ZFP36 ring finger protein like 2 678
hsa DDX5 DEAD-box helicase 5 1655 IDA
hsa DDX6 DEAD-box helicase 6 1656
hsa DXO decapping exoribonuclease 1797 IBA
hsa EIF4G1 eukaryotic translation initiation factor 4 gamma 1 1981
hsa ETF1 eukaryotic translation termination factor 1 2107
hsa GSPT1 G1 to S phase transition 1 2935
hsa EIF3E eukaryotic translation initiation factor 3 subunit E 3646
hsa RPSA ribosomal protein SA 3921
hsa MAGOH mago homolog, exon junction complex subunit 4116
hsa MLH1 mutL homolog 1 4292
hsa NCBP1 nuclear cap binding protein subunit 1 4686
hsa RPL10A ribosomal protein L10a 4736
hsa CNOT2 CCR4-NOT transcription complex subunit 2 4848
hsa CNOT3 CCR4-NOT transcription complex subunit 3 4849
hsa CNOT4 CCR4-NOT transcription complex subunit 4 4850
hsa PARN poly(A)-specific ribonuclease 5073
hsa EXOSC9 exosome component 9 5393 IMP
hsa EXOSC10 exosome component 10 5394 IMP
hsa POLR2D RNA polymerase II subunit D 5433
hsa POLR2G RNA polymerase II subunit G 5436
hsa PPP2CA protein phosphatase 2 catalytic subunit alpha 5515
hsa PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 5518
hsa PPP2R2A protein phosphatase 2 regulatory subunit Balpha 5520
hsa UPF1 UPF1 RNA helicase and ATPase 5976 IMP
hsa RPL3 ribosomal protein L3 6122
hsa RPL4 ribosomal protein L4 6124
hsa RPL5 ribosomal protein L5 6125
hsa RPL6 ribosomal protein L6 6128
hsa RPL7 ribosomal protein L7 6129
hsa RPL7A ribosomal protein L7a 6130
hsa RPL8 ribosomal protein L8 6132
hsa RPL9 ribosomal protein L9 6133
hsa RPL10 ribosomal protein L10 6134
hsa RPL11 ribosomal protein L11 6135
hsa RPL12 ribosomal protein L12 6136
hsa RPL13 ribosomal protein L13 6137
hsa RPL15 ribosomal protein L15 6138
hsa RPL17 ribosomal protein L17 6139
hsa RPL18 ribosomal protein L18 6141
hsa RPL18A ribosomal protein L18a 6142
hsa RPL19 ribosomal protein L19 6143
hsa RPL21 ribosomal protein L21 6144
hsa RPL22 ribosomal protein L22 6146
hsa RPL23A ribosomal protein L23a 6147
hsa RPL24 ribosomal protein L24 6152
hsa RPL26 ribosomal protein L26 6154
hsa RPL27 ribosomal protein L27 6155
hsa RPL30 ribosomal protein L30 6156
hsa RPL27A ribosomal protein L27a 6157
hsa RPL28 ribosomal protein L28 6158
hsa RPL29 ribosomal protein L29 6159
hsa RPL31 ribosomal protein L31 6160
hsa RPL32 ribosomal protein L32 6161
hsa RPL34 ribosomal protein L34 6164
hsa RPL35A ribosomal protein L35a 6165
hsa RPL37 ribosomal protein L37 6167
hsa RPL37A ribosomal protein L37a 6168
hsa RPL38 ribosomal protein L38 6169
hsa RPL39 ribosomal protein L39 6170
hsa RPL41 ribosomal protein L41 6171
hsa RPL36A ribosomal protein L36a 6173
hsa RPLP0 ribosomal protein lateral stalk subunit P0 6175
hsa RPLP1 ribosomal protein lateral stalk subunit P1 6176
hsa RPLP2 ribosomal protein lateral stalk subunit P2 6181
hsa RPS2 ribosomal protein S2 6187
hsa RPS3 ribosomal protein S3 6188
hsa RPS3A ribosomal protein S3A 6189
hsa RPS4X ribosomal protein S4 X-linked 6191
hsa RPS4Y1 ribosomal protein S4 Y-linked 1 6192
hsa RPS5 ribosomal protein S5 6193
hsa RPS6 ribosomal protein S6 6194
hsa RPS7 ribosomal protein S7 6201
hsa RPS8 ribosomal protein S8 6202
hsa RPS9 ribosomal protein S9 6203
hsa RPS10 ribosomal protein S10 6204
hsa RPS11 ribosomal protein S11 6205
hsa RPS12 ribosomal protein S12 6206
hsa RPS13 ribosomal protein S13 6207
hsa RPS14 ribosomal protein S14 6208
hsa RPS15 ribosomal protein S15 6209
hsa RPS15A ribosomal protein S15a 6210
hsa RPS16 ribosomal protein S16 6217
hsa RPS17 ribosomal protein S17 6218
hsa RPS18 ribosomal protein S18 6222
hsa RPS19 ribosomal protein S19 6223
hsa RPS20 ribosomal protein S20 6224
hsa RPS21 ribosomal protein S21 6227
hsa RPS23 ribosomal protein S23 6228
hsa RPS24 ribosomal protein S24 6229
hsa RPS25 ribosomal protein S25 6230
hsa RPS26 ribosomal protein S26 6231
hsa RPS27 ribosomal protein S27 6232
hsa RPS27A ribosomal protein S27a 6233
hsa RPS28 ribosomal protein S28 6234
hsa RPS29 ribosomal protein S29 6235
hsa SKIV2L Ski2 like RNA helicase 6499
hsa SSB small RNA binding exonuclease protection factor La 6741
mmu Atm ataxia telangiectasia mutated 11920
mmu Zfp36l1 zinc finger protein 36, C3H type-like 1 12192
mmu Zfp36l2 zinc finger protein 36, C3H type-like 2 12193
mmu Noct nocturnin 12457
mmu Ddx5 DEAD box helicase 5 13207 ISO
mmu Gspt1 G1 to S phase transition 1 14852
mmu Gspt2 G1 to S phase transition 2 14853
mmu Eif3e eukaryotic translation initiation factor 3, subunit E 16341
mmu Magoh mago homolog, exon junction complex core component 17149
mmu Mlh1 mutL homolog 1 17350
mmu Pabpc1 poly(A) binding protein, cytoplasmic 1 18458
mmu Cnot7 CCR4-NOT transcription complex, subunit 7 18983
mmu Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) 19704 ISO
mmu Rnps1 RNA binding protein with serine rich domain 1 19826
mmu Ssb Sjogren syndrome antigen B 20823
mmu Zfp36 zinc finger protein 36 22695
mmu Xrn1 5'-3' exoribonuclease 1 24127 IBA,ISO
mmu Xrn2 5'-3' exoribonuclease 2 24128 IBA
mmu Exosc5 exosome component 5 27998
mmu Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated 50783 IEA
mmu Exosc9 exosome component 9 50911 ISO
mmu Exosc10 exosome component 10 50912 ISO
mmu Pnrc2 proline-rich nuclear receptor coactivator 2 52830
mmu Gtpbp2 GTP binding protein 2 56055
mmu Rbm8a RNA binding motif protein 8a 60365
mmu Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated 66094 IEA
mmu Exosc3 exosome component 3 66362
mmu Magohb mago homolog B, exon junction complex core component 66441
mmu Exosc7 exosome component 7 66446
mmu Lsm1 LSM1 homolog, mRNA degradation associated 67207 IEA
mmu Prpf18 pre-mRNA processing factor 18 67229
mmu Mtpap mitochondrial poly(A) polymerase 67440
mmu Patl2 protein associated with topoisomerase II homolog 2 (yeast) 67578
mmu Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 67678 IEA
mmu Polr2g polymerase (RNA) II (DNA directed) polypeptide G 67710
mmu Ncbp2 nuclear cap binding protein subunit 2 68092
mmu Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast) 68134
mmu Cnot8 CCR4-NOT transcription complex, subunit 8 69125
mmu Polr2d polymerase (RNA) II (DNA directed) polypeptide D 69241
mmu Dcps decapping enzyme, scavenger 69305
mmu Exosc8 exosome component 8 69639
mmu Mrto4 mRNA turnover 4, ribosome maturation factor 69902 IBA
mmu Nbdy negative regulator of P-body association 70123 ISO
mmu Dcp2 decapping mRNA 2 70640
mmu Nbas neuroblastoma amplified sequence 71169 ISO
mmu Dhx34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 71723 ISO
mmu Smg9 SMG9 nonsense mediated mRNA decay factor 71997
mmu Cnot2 CCR4-NOT transcription complex, subunit 2 72068
mmu Exosc6 exosome component 6 72544
mmu Pan3 PAN3 poly(A) specific ribonuclease subunit 72587
mmu Parn poly(A)-specific ribonuclease (deadenylation nuclease) 74108
mmu Smg8 SMG8 nonsense mediated mRNA decay factor 74133
mmu Samd4 sterile alpha motif domain containing 4 74480
mmu Dcp1a decapping mRNA 1A 75901
mmu Pym1 PYM homolog 1, exon junction complex associated factor 78428
mmu Tent2 terminal nucleotidyltransferase 2 100715
mmu Pan2 PAN2 poly(A) specific ribonuclease subunit 103135
mmu Smg6 SMG6 nonsense mediated mRNA decay factor 103677
mmu Cnot6 CCR4-NOT transcription complex, subunit 6 104625
mmu Pelo pelota mRNA surveillance and ribosome rescue factor 105083
mmu Skiv2l superkiller viralicidic activity 2-like (S. cerevisiae) 108077
mmu Exosc4 exosome component 4 109075 ISO
mmu Dxo decapping exoribonuclease 112403 IBA
mmu Casc3 cancer susceptibility candidate 3 192160
mmu Eif4a3 eukaryotic translation initiation factor 4A3 192170
mmu Dis3l2 DIS3 like 3'-5' exoribonuclease 2 208718
mmu Pde12 phosphodiesterase 12 211948
mmu Tent4b terminal nucleotidyltransferase 4B 214627
mmu Ttc37 tetratricopeptide repeat domain 37 218343
mmu Etf1 eukaryotic translation termination factor 1 225363
mmu Patl1 protein associated with topoisomerase II homolog 1 (yeast) 225929
mmu Smg7 SMG7 nonsense mediated mRNA decay factor 226517
mmu Exosc2 exosome component 2 227715
mmu Helz2 helicase with zinc finger 2, transcriptional coactivator 229003
mmu Smg5 SMG5 nonsense mediated mRNA decay factor 229512
mmu Csde1 cold shock domain containing E1, RNA binding 229663
mmu Zc3h12a zinc finger CCCH type containing 12A 230738
mmu Thrap3 thyroid hormone receptor associated protein 3 230753 ISO
mmu Cnot6l CCR4-NOT transcription complex, subunit 6-like 231464
mmu Cnot3 CCR4-NOT transcription complex, subunit 3 232791
mmu Samd4b sterile alpha motif domain containing 4B 233033
mmu Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase 233789
mmu Pcid2 PCI domain containing 2 234069
mmu Cnot1 CCR4-NOT transcription complex, subunit 1 234594
mmu Edc4 enhancer of mRNA decapping 4 234699
mmu Ago1 argonaute RISC catalytic subunit 1 236511 ISO
mmu Pnldc1 poly(A)-specific ribonuclease (PARN)-like domain containing 1 240023
mmu Ctif CBP80/20-dependent translation initiation factor 269037
mmu Dcp1b decapping mRNA 1B 319618
mmu Rc3h2 ring finger and CCCH-type zinc finger domains 2 319817
mmu Upf2 UPF2 regulator of nonsense transcripts homolog (yeast) 326622
mmu Zfp36l3 zinc finger protein 36, C3H type-like 3 333473
mmu Edc3 enhancer of mRNA decapping 3 353190
mmu Rc3h1 RING CCCH (C3H) domains 1 381305 IMP,ISO
mmu Ncbp1 nuclear cap binding protein subunit 1 433702
mmu Rbm8a2 RNA binding motif protein 8A2 545388
mmu Eif4a3l1 eukaryotic translation initiation factor 4A3 like 1 668137
rno Zfp36l1 zinc finger protein 36, C3H type-like 1 29344
rno Ptbp1 polypyrimidine tract binding protein 1 29497 IMP
rno Hnrnpd heterogeneous nuclear ribonucleoprotein D 79256
rno Zfp36 zinc finger protein 36 79426
rno Mlh1 mutL homolog 1 81685
rno Ssb small RNA binding exonuclease protection factor La 81783
rno Polr2g RNA polymerase II subunit G 117017
rno Csde1 cold shock domain containing E1 117180
rno Pabpc1 poly(A) binding protein, cytoplasmic 1 171350
rno Prpf18 pre-mRNA processing factor 18 171552
rno Casc3 CASC3 exon junction complex subunit 259170
rno Dcps decapping enzyme, scavenger 266605
rno Rnps1 RNA binding protein with serine rich domain 1 287113
rno Cnot6 CCR4-NOT transcription complex, subunit 6 287249
rno Smg6 SMG6 nonsense mediated mRNA decay factor 287522
rno Smg8 SMG8 nonsense mediated mRNA decay factor 287596
rno Ddx5 DEAD-box helicase 5 287765 ISO
rno Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated 290647 IEA
rno Dcp2 decapping mRNA 2 291604
rno Cnot1 CCR4-NOT transcription complex, subunit 1 291841
rno Skiv2l Ski2 like RNA helicase 294260
rno Ttc37 tetratricopeptide repeat domain 37 294595
rno Pelo pelota mRNA surveillance and ribosome rescue factor 294754
rno Exosc9 exosome component 9 294975 ISO
rno Exosc8 exosome component 8 295050
rno Rbm8a RNA binding motif protein 8A 295284
rno Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 297455 IEA
rno Ncbp1 nuclear cap binding protein subunit 1 298075
rno Magoh mago homolog, exon junction complex subunit 298385
rno Mrto4 MRT4 homolog, ribosome maturation factor 298586 IBA
rno Zfp36l2 zinc finger protein 36, C3H type-like 2 298765
rno Cnot2 CCR4-NOT transcription complex, subunit 2 299805
rno Eif3el1 eukaryotic translation initiation factor 3, subunit E-like 1 299872
rno Exosc4 exosome component 4 300045 ISO
rno Atm ATM serine/threonine kinase 300711
rno Xrn1 5'-3' exoribonuclease 1 300944 IBA,ISO
rno Samd4a sterile alpha motif domain containing 4A 305826
rno Pde12 phosphodiesterase 12 306231
rno Cnot7 CCR4-NOT transcription complex, subunit 7 306492
rno Mtpap mitochondrial poly(A) polymerase 307050
rno Etf1 eukaryotic translation termination factor 1 307503
rno Tent4b terminal nucleotidyltransferase 4B 307745
rno Exosc6 exosome component 6 307850
rno Cnot3 CCR4-NOT transcription complex, subunit 3 308311
rno Exosc5 exosome component 5 308441
rno Samd4b sterile alpha motif domain containing 4B 308473
rno Noct nocturnin 310395
rno Rc3h2 ring finger and CCCH-type domains 2 311909
rno Exosc3 exosome component 3 313243
rno Upf3b UPF3B, regulator of nonsense mediated mRNA decay 313449
rno Tut4 terminal uridylyl transferase 4 313481
rno Zc3h12a zinc finger CCCH type containing 12A 313587
rno Thrap3 thyroid hormone receptor associated protein 3 313591 ISO,ISS
rno Ago1 argonaute RISC component 1 313594 ISO
rno Exosc10 exosome component 10 313707 ISO
rno Edc3 enhancer of mRNA decapping 3 315708
rno Exosc7 exosome component 7 316098
rno Parn poly(A)-specific ribonuclease 360464
rno Pan3 poly(A) specific ribonuclease subunit PAN3 360760
rno Smg7 SMG7 nonsense mediated mRNA decay factor 360855
rno Cnot6l CCR4-NOT transcription complex, subunit 6-like 360917
rno Dcp1a decapping mRNA 1A 361109
rno Eri1 exoribonuclease 1 361159
rno Upf3a UPF3A, regulator of nonsense mediated mRNA decay 361176
rno Pcid2 PCI domain containing 2 361182
rno Upf2 UPF2, regulator of nonsense mediated mRNA decay 361271
rno Edc4 enhancer of mRNA decapping 4 361399
rno Pnldc1 PARN like ribonuclease domain containing exonuclease 1 361478
rno Patl1 PAT1 homolog 1, processing body mRNA decay factor 361736
rno Dxo decapping exoribonuclease 361799 IBA
rno Tent2 terminal nucleotidyltransferase 2 361878
rno Xrn2 5'-3' exoribonuclease 2 362229 IBA
rno Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated 362829 IEA
rno Gtpbp2 GTP binding protein 2 363195
rno Cnot8 CCR4-NOT transcription complex, subunit 8 363603
rno Lsm1 LSM1 homolog, mRNA degradation associated 364624
rno Polr2d RNA polymerase II subunit D 364834
rno Ctif cap binding complex dependent translation initiation factor 364900
rno Smg9 SMG9 nonsense mediated mRNA decay factor 365215
rno Exosc2 exosome component 2 366017
rno Patl2 PAT1 homolog 2 366176
rno Pym1 PYM homolog 1, exon junction complex associated factor 366790
rno Dis3l2 DIS3-like 3'-5' exoribonuclease 2 367307
rno Pan2 poly(A) specific ribonuclease subunit PAN2 408200
rno Tut1 terminal uridylyl transferase 1, U6 snRNA-specific 499314
rno Dcp1b decapping mRNA 1B 500305
rno Tut7 terminal uridylyl transferase 7 501515
rno Rc3h1 ring finger and CCCH-type domains 1 680586 ISO
rno Smg5 SMG5 nonsense mediated mRNA decay factor 681012
rno Upf1 UPF1, RNA helicase and ATPase 684558 ISO
rno Dhx34 DExH-box helicase 34 684903 ISO
rno Eif4a3 eukaryotic translation initiation factor 4A3 688288
rno Ncbp2 nuclear cap binding protein subunit 2 689116
rno Nbas NBAS subunit of NRZ tethering complex 690073 ISO
rno Magohb mago homolog B, exon junction complex subunit 690303
rno Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 691397
rno Pnrc2 proline-rich nuclear receptor coactivator 2 100125373
rno Eif3e eukaryotic translation initiation factor 3 subunit E 103692906
gga EDC3 enhancer of mRNA decapping 3 415294
gga EIF4A3 eukaryotic translation initiation factor 4A3 416704
gga PNRC2 proline rich nuclear receptor coactivator 2 419688
gga XRN2 5'-3' exoribonuclease 2 421236 IBA
gga LOC422214 nuclear cap binding protein subunit 2, 20kDa 422214
gga CNOT7 CCR4-NOT transcription complex subunit 7 422733
gga NCBP1 nuclear cap binding protein subunit 1 427379
gga PAN2 PAN2 poly(A) specific ribonuclease subunit 429172
gga PELO pelota homolog (Drosophila) 430689
dre ncbp2 nuclear cap binding protein subunit 2 192325
dre etf1b eukaryotic translation termination factor 1b 266989
dre xrn2 5'-3' exoribonuclease 2 321940 IBA
dre exosc8 exosome component 8 323016
dre cnot6a CCR4-NOT transcription complex, subunit 6a 324048
dre polr2g RNA polymerase II subunit G 324088
dre exosc6 exosome component 6 326786
dre cnot3b CCR4-NOT transcription complex, subunit 3b 327627
dre dcp1a decapping mRNA 1A 360153
dre dcp2 decapping mRNA 2 393121
dre pym1 PYM homolog 1, exon junction complex associated factor 393566
dre lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated 393669 IEA,IEA
dre exosc4 exosome component 4 393712
dre upf3b UPF3B regulator of nonsense mediated mRNA decay 393929
dre xrn1 5'-3' exoribonuclease 1 394008 IBA,IEA
dre eif4a3 eukaryotic translation initiation factor 4A3 394053
dre exosc10 exosome component 10 394064
dre pelo pelota mRNA surveillance and ribosome rescue factor 394111
dre dcps decapping enzyme, scavenger 402850
dre casc3 casc3 exon junction complex subunit 403025
dre upf1 UPF1 RNA helicase and ATPase 406783 IGI,IMP
dre cnot8 CCR4-NOT transcription complex, subunit 8 406788
dre prpf18 PRP18 pre-mRNA processing factor 18 homolog (yeast) 431751
dre polr2d RNA polymerase II subunit D 436588
dre lsm1 LSM1, U6 small nuclear RNA associated 445157 IEA
dre cnot1 CCR4-NOT transcription complex, subunit 1 448949
dre cnot3a CCR4-NOT transcription complex, subunit 3a 449540
dre exosc9 exosome component 9 450057
dre pcid2 PCI domain containing 2 492509
dre rbm8a RNA binding motif protein 8A 503767
dre edc3 enhancer of mRNA decapping 3 homolog (S. cerevisiae) 504054
dre exosc2 exosome component 2 550234
dre exosc7 exosome component 7 550247
dre mrto4 MRT4 homolog, ribosome maturation factor 550350 IBA
dre smg5 SMG5 nonsense mediated mRNA decay factor 553261
dre cnot6l CCR4-NOT transcription complex, subunit 6-like 553665
dre dhx34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 555838 IMP
dre patl2 PAT1 homolog 2 556271
dre nbas NBAS subunit of NRZ tethering complex 556592 IMP
dre rc3h1b ring finger and CCCH-type domains 1b 558213
dre skiv2l SKI2 homolog, superkiller viralicidic activity 2-like 559653
dre rc3h2 ring finger and CCCH-type domains 2 559834
dre cnot6b CCR4-NOT transcription complex, subunit 6b 560386
dre smg9 SMG9 nonsense mediated mRNA decay factor 562557
dre si:dkey-206d17.12 si:dkey-206d17.12 563108
dre etf1a eukaryotic translation termination factor 1a 563172
dre exosc3 exosome component 3 565000
dre pnrc2 proline-rich nuclear receptor coactivator 2 565522 IGI,IMP
dre smg7 SMG7 nonsense mediated mRNA decay factor 565575
dre edc4 enhancer of mRNA decapping 4 565659
dre dis3l2 DIS3 like 3'-5' exoribonuclease 2 566106
dre upf3a UPF3A regulator of nonsense mediated mRNA decay 566608
dre smg8 SMG8 nonsense mediated mRNA decay factor 567424
dre dcp1b decapping mRNA 1B 568176
dre rc3h1a ring finger and CCCH-type domains 1a 568568
dre upf2 UPF2 regulator of nonsense mediated mRNA decay 569006
dre smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase 569810
dre tnrc6a trinucleotide repeat containing adaptor 6A 571871
dre lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated 573047 IEA
dre mir430b-10 microRNA 430b-10 613243
dre pde12 phosphodiesterase 12 692319
dre exosc5 exosome component 5 751632
dre cnot7 CCR4-NOT transcription complex, subunit 7 768119
dre parn poly(A)-specific ribonuclease (deadenylation nuclease) 791461
dre pan2 poly(A) specific ribonuclease subunit PAN2 792831
dre magoh mago homolog, exon junction complex subunit 100005893
dre patl1 PAT1 homolog 1, processing body mRNA decay factor 100009659
dre cnot2 CCR4-NOT transcription complex, subunit 2 100037372
dre pan3 poly(A) specific ribonuclease subunit PAN3 100126012
dre samd4a sterile alpha motif domain containing 4A 100149858
dre smg6 SMG6 nonsense mediated mRNA decay factor 100334020
dre lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 100535720 IEA
dme nonC no-on-and-no-off transient C 31625
dme Upf2 Upf2 31724
dme Upf1 Upf1 RNA helicase 32153
dme Rrp45 Rrp45 32665
dme CG8915 uncharacterized protein 32715
dme CG32533 uncharacterized protein 32933
dme pcm pacman 32935 IBA
dme Rat1 Rat1 5'-3' exoribonuclease 33964 IBA
dme pelo pelota 34286
dme me31B maternal expression at 31B 34364
dme CG6729 uncharacterized protein 34484
dme Ge-1 Ge-1 34541
dme Ski6 Ski6 34721
dme Smg5 Smg5 nonsense mediated mRNA decay factor 34804
dme CG15262 uncharacterized protein 34901
dme LSm7 Like Sm 7 35003 IEA
dme Not3 CCR4-NOT transcription complex subunit 3 35501
dme Pabp2 Pabp2 35788
dme PAN2 Poly(A)-binding protein-dependent poly(A) ribonuclease 2 35893
dme CG8777 uncharacterized protein 35921 IMP
dme RpLP0-like Ribosomal protein LP0-like 36058 IBA
dme cuff cutoff 36269 IBA
dme Rrp42 Rrp42 36766
dme LSm1 Like Sm 1 37413
dme Snp Snipper 37511
dme Rrp4 Rrp4 37731
dme Pym Partner of Y14 and Mago 37780
dme DCP1 Decapping protein 1 37790 IMP
dme Upf3 Upf3 37792
dme PAN3 Poly(A) specific ribonuclease subunit PAN3 38369
dme armi armitage 38427
dme pix pixie 39027
dme smg smaug 39034
dme PCID2 PCI domain-containing protein 2 39306
dme Pop2 Pop2 39366
dme DCP2 Decapping protein 2 39722 IMP
dme roq roquin 39818
dme Edc3 Enhancer of decapping 3 39957
dme Mtr3 Mtr3 40173
dme Rga Regena 40683
dme CG2091 uncharacterized protein 40711
dme pum pumilio 41094
dme Rrp46 Rrp46 41270
dme sqd squid 41666
dme Rrp6 Rrp6 41798
dme Patr-1 Protein associated with topo II related - 1 42058
dme Prp18 Prp18 42285
dme CG7907 uncharacterized protein 42539
dme tst twister 42813
dme LSm3 Like Sm 3 42842 IEA
dme twin twin 42880
dme Smg6 Smg6 42994
dme gw gawky 43808
dme Cbp80 cap binding protein 80 44409
dme nompA no mechanoreceptor potential A 45587
dme Rpb7 Rpb7 261631
dme Rrp40 Ribosomal RNA processing 40 319033
dme CG31759 uncharacterized protein 326158
dme Rai1 Rat1 Interacting Protein 1 2768882 IBA
dme CG3857 uncharacterized protein 2768908
dme CG17768 uncharacterized protein 3772012 IEA
dme Not1 Not1 5740252
dme Rpb4 RNA polymerase II subunit Rpb4 14462484
cel smg-2 Regulator of nonsense transcripts 1 171696 IMP
cel rpb-7 DNA-directed RNA polymerase II subunit RPB7 171877
cel edc-4 FHA domain-containing protein 171907
cel ain-2 ALG-1 INteracting protein 172076 IGI
cel dom-3 Decapping nuclease dom-3 172124 IBA
cel F33D11.10 RNA helicase 172258
cel ncbp-1 Nuclear cap-binding protein subunit 1 172345
cel smg-5 PINc domain-containing protein 172391
cel smg-1 Serine/threonine-protein kinase smg-1 172418
cel smgl-1 Uncharacterized protein 172561 IMP
cel edc-3 DFDF domain-containing protein 172653
cel mag-1 Protein mago nashi homolog 173073
cel Y47H10A.4 Uncharacterized protein 173090 IBA
cel Y47H10A.5 Uncharacterized protein 173091 IBA
cel M01G12.14 Uncharacterized protein 173093 IBA
cel casc-3 Protein CASC3 173203
cel ntl-2 NOT2_3_5 domain-containing protein 173773
cel tiar-1 RRM domain-containing protein 173967
cel exos-8 Ribosomal RNA-processing protein 43 174111
cel F10E7.5 Ribosome assembly factor mrt4 174168 IBA
cel rpb-4 RPOL4c domain-containing protein 174208
cel hel-1 Spliceosome RNA helicase DDX39B homolog 174333
cel F07H5.10 RAI1 domain-containing protein 174408 IBA
cel crn-5 RNase_PH domain-containing protein 174634
cel lsm-1 U6 snRNA-associated Sm-like protein LSm1 174700
cel patr-1 Protein PAT1 homolog 1 174808
cel tiar-2 TIA-1/TIAL RNA binding protein homolog 174909
cel xrn-1 5'-3' exoribonuclease 1 175059 IBA,IEA
cel xrn-2 5'-3' exoribonuclease 2 homolog 175071 IBA
cel smg-8 Protein smg-8 175103
cel smg-9 Protein smg-9 175132
cel smg-6 PINc domain-containing protein 175367
cel rnp-4 RNA-binding protein 8A 175572
cel C27F2.10 PCI domain-containing protein 2 homolog 175675
cel disl-2 DIS3-like exonuclease 2 175748
cel let-711 Not1 domain-containing protein 175971 IMP
cel panl-2 PAN (PolyA-specific riboNucLease) subunit 175974
cel exos-9 Exosome complex component RRP45 176012
cel panl-3 PAN2-PAN3 deadenylation complex subunit PAN3 176391
cel pde-12 Endo/exonuclease/phosphatase domain-containing protein 176514
cel rle-1 Regulation of longevity by E3 ubiquitin-protein ligase 176525
cel ntl-3 NOT2_3_5 domain-containing protein 176614
cel ccf-1 CCR4-NOT transcription complex subunit 7 176625
cel dcap-1 mRNA_decap_C domain-containing protein 176924
cel smgl-2 Uncharacterized protein 177135 IMP
cel smg-3 Suppressor with Morphological effect on Genitalia 177397
cel exos-2 Ribosomal RNA-processing protein 4 177403
cel smg-7 TPR_REGION domain-containing protein 177435
cel prp-18 PRP18 homolog 177840
cel skih-2 uncharacterized protein 178017
cel ccr-4 Endo/exonuclease/phosphatase domain-containing protein;Poly(A)-specific ribonuclease 178184
cel dcap-2 Nudix hydrolase domain-containing protein;mRNA-decapping enzyme 2 178321
cel ttc-37 TeTratriCopeptide repeat domain protein related 178907
cel ZC190.4 SAM domain-containing protein 179248
cel tag-153 NOT2_3_5 domain-containing protein 179312
cel smg-4 Smg4_UPF3 domain-containing protein 179371
cel dcs-1 m7GpppX diphosphatase 180315
cel exos-7 RNase_PH domain-containing protein 180369
cel ain-1 ALG-1 INteracting protein 181719 IGI
cel exos-3 Ribosomal RNA-processing protein 40 186604
cel parn-1 3'-5' exoribonuclease parn-1 187256
cel M01G12.7 Uncharacterized protein 187384 IBA
cel M01G12.9 Uncharacterized protein 187385 IBA
cel pelo-1 Protein pelota homolog 187888
cel Y47H10A.3 Uncharacterized protein 190008 IBA
cel exos-4.2 RNase_PH domain-containing protein 259488
cel lin-4 266860 IMP
cel let-7 266952 IMP
cel crn-3 HRDC domain-containing protein 3565889
cel C37H5.14 RAI1 domain-containing protein 6418705 IBA
cel eol-1 RAI1 domain-containing protein 6418775 IBA
cel prp-19 Pre-mRNA-processing factor 19 24104882
cel exos-4.1 Putative exosome complex component RRP41 24105309
sce GBP2 single-stranded telomeric DNA-binding/mRNA-binding protein 850346
sce YCL001W-A uncharacterized protein 850355
sce YCL001W-B uncharacterized protein 850356
sce RRP43 exosome non-catalytic core subunit RRP43 850401
sce PAT1 Pat1p 850440
sce CDC39 CCR4-NOT core subunit CDC39 850455
sce PUF3 mRNA-binding protein PUF3 850647 IDA
sce IRC25 Irc25p 850708
sce TIS11 Tis11p 850827 IMP
sce RMP1 Rmp1p 850837
sce DCS1 5'-(N(7)-methyl 5'-triphosphoguanosine)-(mRNA) diphosphatase 850974
sce NMD4 Nmd4p 851077
sce SKI2 SKI complex RNA helicase subunit SKI2 851114
sce SIR3 chromatin-silencing protein SIR3 851163
sce POP5 RNA-binding protein POP5 851200
sce CCR4 CCR4-NOT core exoribonuclease subunit CCR4 851212
sce AIR2 TRAMP complex RNA-binding subunit 851379
sce CDC36 CCR4-NOT core subunit CDC36 851389
sce DHH1 DExD/H-box ATP-dependent RNA helicase DHH1 851394
sce RRP42 exosome non-catalytic core subunit RRP42 851447
sce CTH1 putative mRNA-binding protein CTH1 851729 IGI
sce SAC3 Sac3p 851737
sce SUP35 translation termination factor GTPase eRF3 851752
sce EBS1 Ebs1p 851787
sce RRP45 exosome non-catalytic core subunit RRP45 851874
sce IPK1 inositol pentakisphosphate 2-kinase 851910
sce DXO1 Dxo1p 851976 IBA
sce RPB7 DNA-directed RNA polymerase II subunit RPB7 852013
sce PIN4 Pin4p 852229
sce POP8 ribonuclease P 852263
sce POP7 ribonuclease P/MRP protein subunit POP7 852465
sce POP4 RNase P/RNase MRP complex subunit 852560
sce RAI1 decapping nuclease 852646 IBA,IMP
sce EDC1 Edc1p 852650
sce SKI8 SKI complex subunit WD repeat protein SKI8 852659
sce XRN1 chromatin-binding exonuclease XRN1 852702 IBA,IEA,IMP
sce PAN2 poly(A)-specific ribonuclease 852786
sce PUF4 Puf4p 852870
sce PRP18 mRNA splicing protein PRP18 852889
sce POP6 ribonuclease P/MRP protein subunit POP6 852918
sce UPF3 Upf3p 852963
sce RRP46 exosome non-catalytic core subunit RRP46 852987
sce YGR122W uncharacterized protein 853020
sce MTR3 exosome non-catalytic core subunit MTR3 853062
sce SKI6 exosome non-catalytic core subunit SKI6 853109
sce RPB4 DNA-directed RNA polymerase II subunit RPB4 853301
sce LSM1 Lsm1p 853318 IEA
sce MTR4 ATP-dependent RNA helicase MTR4 853397
sce YJR084W uncharacterized protein 853546
sce JSN1 Jsn1p 853553
sce EAP1 Eap1p 853631
sce FRE2 ferric/cupric-chelate reductase 853660
sce CUE2 Cue2p 853772
sce PAN3 Pan3p 853843
sce SKA1 Ska1p 853845
sce MRT4 Mrt4p 853860 IBA,IMP
sce HBS1 ribosome dissociation factor GTPase HBS1 853959
sce MLP1 Mlp1p 853970
sce ESL2 Esl2p 853971
sce HRP1 Hrp1p 853997
sce DCP1 Dcp1p 854016
sce RRP40 exosome non-catalytic core subunit RRP40 854023
sce CDC33 translation initiation factor eIF4E 854026
sce PAP2 non-canonical poly(A) polymerase PAP2 854034
sce THP1 Thp1p 854082
sce NGL1 RNA exonuclease 854115
sce DIS3 exosome catalytic subunit DIS3 854138
sce HTZ1 histone H2AZ 854150
sce RRP6 exosome nuclease subunit RRP6 854162
sce RAT1 ssRNA exonuclease RAT1 854213 IBA
sce SKI7 Ski7p 854243
sce SWT1 mRNA-processing endoribonuclease 854337
sce DCS2 5'-(N(7)-methyl 5'-triphosphoguanosine)-(mRNA) diphosphatase 854344
sce VTS1 Vts1p 854541 IMP
sce ESL1 Esl1p 854655
sce AIR1 TRAMP complex RNA-binding subunit 854731
sce NOT3 CCR4-NOT core subunit NOT3 854773
sce NAM7 ATP-dependent RNA helicase NAM7 855104 IMP
sce STO1 Sto1p 855155
sce RNT1 ribonuclease III 855280
sce TRF5 non-canonical poly(A) polymerase TRF5 855417
sce POP3 Pop3p 855439
sce NRD1 Nrd1 complex RNA-binding subunit 855470
sce CSL4 exosome non-catalytic core subunit CSL4 855489
sce POP1 ribonuclease P/MRP protein subunit POP1 855500
sce LSM7 Sm-like protein LSM7 855575 IEA,IMP
sce DCP2 decapping enzyme complex catalytic subunit 855605
sce DBP2 DEAD-box ATP-dependent RNA helicase DBP2 855611
sce PUB1 Pub1p 855716
sce HRB1 mRNA-binding protein 855728
sce DOM34 ribosome dissociation factor DOM34 855731
sce MPP6 Mpp6p 855758
sce POP2 CCR4-NOT core DEDD family RNase subunit POP2 855788
sce YPL199C uncharacterized protein 855902
sce NAB3 Nab3p 855911
sce CBC2 nuclear cap-binding protein subunit CBC2 855925
sce SSN3 cyclin-dependent serine/threonine protein kinase SSN3 856065
sce PUF2 Puf2p 856155
sce NOT5 CCR4-NOT core subunit NOT5 856186
sce MRD1 RNA-binding ribosome biosynthesis protein MRD1 856228
spo not2 putative CCR4-Not complex subunit Not2 2538778
spo SPCC550.03c putative Ski complex RNA helicase Ski2 2538841
spo SPCC24B10.15 putative RNA endoribonuclease 2538887
spo ccr4 putative CCR4-Not complex subunit Ccr4 2538913
spo lsm7 putative U6 snRNP-associated protein Lsm7 2538964 IEA
spo SPCC16C4.05 putative Rnase P/MRP subunit 2538975
spo caf1 CCR4-Not complex CAF1 family ribonuclease subunit Caf1 2539041
spo cti1 Cut3-interacting putative exosome subunit Cti1 2539105
spo SPCC757.08 putative exosome subunit Rrp45 2539106
spo SPCC1919.05 putative Ski complex TPR repeat subunit Ski3 2539136
spo SPCC1682.08c RNA-binding protein Mcp2 2539137
spo sts5 RNB-like protein 2539180
spo SPCC1235.03 SMR domain-containing protein 2539296
spo csl4 putative exosome subunit Csl4 2539351
spo prp18 putative U5 snRNP-associated protein Prp18 2539357
spo SPCC18B5.06 putative translation release factor eRF1 family protein 2539371
spo SPCC16C4.16c hypothetical protein 2539386
spo mmi1 YTH family RNA-binding protein Mmi1 2539540
spo rrp46 putative exosome subunit Rrp46 2539660
spo pab2 poly(A)-binding protein Pab2 2539733
spo cip1 RNA-binding protein Cip1 2539823
spo tif452 translation initiation factor eIF4E 4F complex subunit 2539870
spo mrt4 putative mRNA turnover and ribosome assembly protein Mrt4 2539913 IBA,ISO
spo zfs1 zinc finger protein 2539958 IMP
spo SPBC1105.07c putative nuclear pore-associated protein Thp1-Sac3 complex subunit 2540003
spo SPBC16G5.10 putative exosome subunit Rrp42 2540116
spo SPBC13E7.03c putative RNA hairpin-binding protein 2540161
spo SPBC17D1.03c putative exosome subunit Rrp43 2540189
spo rec14 Ski complex subunit Rec14 2540221
spo ppk26 PAN complex subunit Ppk26 2540231
spo SPBC337.12 zinc finger CCCH domain-containing protein 2540291
spo SPBC2F12.03c putative EST1 family protein 2540346
spo dis3 putative 3'-5' exoribonuclease subunit Dis3 2540398
spo SPBC211.08c exosome complex component mtr3 2540412
spo SPBC25B2.01 putative elongation factor 1 alpha-like protein 2540430
spo lsm4 putative U6 snRNP-associated protein Lsm4 2540475 IEA
spo SPBC29A10.09c putative CAF1 family ribonuclease 2540515
spo lsm1 putative mRNA-decapping complex subunit lsm1 2540520
spo edc3 putative mRNA-decapping enhancer Edc3 2540639
spo SPBC19G7.10c putative topoisomerase II-associated deadenylation-dependent mRNA-decapping factor 2540778
spo mni1 protein mni1 2540798
spo SPBC609.01 ribonuclease II family protein 2540838
spo SPBC56F2.08c putative RNA-binding protein 2540913
spo rpb4 DNA-directed RNA polymerase II complex subunit Rpb4 2541011
spo ubi4 ubiquitin 2541030
spo dcp1 mRNA-decapping complex regulatory subunit Dcp1 2541033
spo pla1 poly(A) polymerase Pla1 2541099
spo ste13 ATP-dependent RNA helicase Ste13 2541216
spo SPBP35G2.14 RNA-binding protein 2541323
spo nhm1 putative m7G(5')pppN diphosphatase 2541340
spo dbp2 ATP-dependent RNA helicase Dbp2 2541383
spo mtr4 TRAMP complex ATP-dependent RNA helicase subunit Mtr4 2541639
spo SPAC7D4.14c hypothetical protein 2541655
spo ubp13 putative poly(A)-specific ribonuclease complex subunit Pan2 2541684
spo SPAP8A3.05 putative ski complex-interacting GTPase 2541693
spo tif45 translation initiation factor eIF4E tif45 2541706
spo SPAC2F7.14c putative exosome subunit Rrp4 2541813
spo SPAC22A12.12c putative exosome subunit Rrp40 2541837
spo caf16 putative CCR4-Not complex subunit Caf16 2541846
spo SPAC22G7.10 fip1-like pre-mRNA polyadenylation factor 2541873
spo SPAC23H4.16c hypothetical protein 2541896
spo not1 putative CCR4-Not complex subunit Not1 2542001
spo SPAC6G9.14 putative RNA-binding protein 2542056
spo mei2 RNA-binding protein Mei2 2542080
spo rcd1 CCR4-NOT complex subunit Rcd1 2542094
spo rpb7 DNA-directed RNA polymerase complex II subunit Rpb7 2542097
spo not3 putative CCR4-Not complex subunit Not3/5 2542126
spo upf2 nonsense-mediated decay protein Upf2 2542147
spo SPAC17H9.02 putative TRAMP complex ATP-dependent RNA helicase 2542173
spo cid16 putative poly(A) polymerase Cid16 2542188
spo exo2 exonuclease II Exo2 2542204 IBA
spo ddb1 damaged DNA-binding protein Ddb1 2542207
spo SPACUNK4.11c M-phase phosphoprotein 6 family protein 2542214
spo puf3 putative RNA-binding protein Puf3 2542300
spo mot2 putative CCR4-Not complex subunit Mot2 2542325
spo upf1 ATP-dependent RNA helicase Upf1 2542327
spo cid1 poly(A) polymerase Cid1 2542420
spo dcp2 mRNA-decapping complex catalytic subunit Dcp2 2542503
spo SPAC1B3.08 putative COP9 signalosome complex subunit 12 2542528
spo SPAC18G6.09c hypothetical protein 2542536
spo din1 Dhp1p-interacting protein Din1 2542540 IBA
spo SPAC1B1.04c putative poly(A)-specific ribonuclease complex subunit Pan3 2542552
spo SPAC6G10.07 putative nuclear cap-binding complex large subunit 2542556
spo SPAC328.05 putative RNA-binding and mRNA export factor 2542567
spo SPAC2C4.07c putative ribonuclease II family protein 2542643
spo dhp1 5'-3' exoribonuclease Dhp1 2542674 IBA
spo upf3 protein upf3 2542908
spo SPAC323.08 putative ribonuclease MRP complex subunit 2543088
spo pcu4 cullin 4 2543116
spo mpf1 putative meiotic PUF family protein 1 2543134
spo cip2 RNA-binding protein Cip2 2543139
spo red1 RNA elimination defective protein red1 2543254
spo rrp41 putative exosome 3'-5' phosphorolytic exoribonuclease Rrp41 2543451
spo SPAC644.16 putative RNA-binding protein 2543462
spo rrp6 putative exosome 3'-5' exoribonuclease subunit Rrp6 2543630
spo SPAC4G8.03c putative RNA-binding protein 2543684
spo pop8 putative RNase P and RNase MRP subunit Pop8 3361273
spo caf4 putative CCR4-Not complex subunit Caf4/Mdv1 3361526
spo SPAC20G4.08 hypothetical protein 5802967
spo new10 protein erh1 14218174


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