GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

118 hsa genes in this database.
36 mmu genes in this database.
32 rno genes in this database.
4 gga genes in this database.
25 dre genes in this database.
21 dme genes in this database.
16 cel genes in this database.
35 sce genes in this database.
27 spo genes in this database.

[QuickGO]

term: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
goid: GO:0000184

Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
hsa EIF4G1 eukaryotic translation initiation factor 4 gamma 1 1981 TAS
hsa ETF1 eukaryotic translation termination factor 1 2107 TAS
hsa GSPT1 G1 to S phase transition 1 2935 TAS
hsa EIF3E eukaryotic translation initiation factor 3 subunit E 3646 IMP
hsa RPSA ribosomal protein SA 3921 TAS
hsa MAGOH mago homolog, exon junction complex subunit 4116 IGI,IMP,TAS
hsa NCBP1 nuclear cap binding protein subunit 1 4686 IBA,IDA,IMP,TAS
hsa RPL10A ribosomal protein L10a 4736 TAS
hsa PARN poly(A)-specific ribonuclease 5073 IEA
hsa EXOSC10 exosome component 10 5394 IEA
hsa PPP2CA protein phosphatase 2 catalytic subunit alpha 5515 TAS
hsa PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 5518 TAS
hsa PPP2R2A protein phosphatase 2 regulatory subunit Balpha 5520 TAS
hsa UPF1 UPF1 RNA helicase and ATPase 5976 IBA,IDA,IMP,NAS,TAS
hsa RPL3 ribosomal protein L3 6122 TAS
hsa RPL4 ribosomal protein L4 6124 TAS
hsa RPL5 ribosomal protein L5 6125 TAS
hsa RPL6 ribosomal protein L6 6128 TAS
hsa RPL7 ribosomal protein L7 6129 TAS
hsa RPL7A ribosomal protein L7a 6130 TAS
hsa RPL8 ribosomal protein L8 6132 TAS
hsa RPL9 ribosomal protein L9 6133 TAS
hsa RPL10 ribosomal protein L10 6134 TAS
hsa RPL11 ribosomal protein L11 6135 TAS
hsa RPL12 ribosomal protein L12 6136 TAS
hsa RPL13 ribosomal protein L13 6137 TAS
hsa RPL15 ribosomal protein L15 6138 TAS
hsa RPL17 ribosomal protein L17 6139 TAS
hsa RPL18 ribosomal protein L18 6141 TAS
hsa RPL18A ribosomal protein L18a 6142 TAS
hsa RPL19 ribosomal protein L19 6143 TAS
hsa RPL21 ribosomal protein L21 6144 TAS
hsa RPL22 ribosomal protein L22 6146 TAS
hsa RPL23A ribosomal protein L23a 6147 TAS
hsa RPL24 ribosomal protein L24 6152 TAS
hsa RPL26 ribosomal protein L26 6154 TAS
hsa RPL27 ribosomal protein L27 6155 TAS
hsa RPL30 ribosomal protein L30 6156 TAS
hsa RPL27A ribosomal protein L27a 6157 TAS
hsa RPL28 ribosomal protein L28 6158 TAS
hsa RPL29 ribosomal protein L29 6159 TAS
hsa RPL31 ribosomal protein L31 6160 TAS
hsa RPL32 ribosomal protein L32 6161 TAS
hsa RPL34 ribosomal protein L34 6164 TAS
hsa RPL35A ribosomal protein L35a 6165 TAS
hsa RPL37 ribosomal protein L37 6167 TAS
hsa RPL37A ribosomal protein L37a 6168 TAS
hsa RPL38 ribosomal protein L38 6169 TAS
hsa RPL39 ribosomal protein L39 6170 TAS
hsa RPL41 ribosomal protein L41 6171 TAS
hsa RPL36A ribosomal protein L36a 6173 TAS
hsa RPLP0 ribosomal protein lateral stalk subunit P0 6175 TAS
hsa RPLP1 ribosomal protein lateral stalk subunit P1 6176 TAS
hsa RPLP2 ribosomal protein lateral stalk subunit P2 6181 TAS
hsa RPS2 ribosomal protein S2 6187 TAS
hsa RPS3 ribosomal protein S3 6188 TAS
hsa RPS3A ribosomal protein S3A 6189 TAS
hsa RPS4X ribosomal protein S4 X-linked 6191 TAS
hsa RPS4Y1 ribosomal protein S4 Y-linked 1 6192 TAS
hsa RPS5 ribosomal protein S5 6193 TAS
hsa RPS6 ribosomal protein S6 6194 TAS
hsa RPS7 ribosomal protein S7 6201 TAS
hsa RPS8 ribosomal protein S8 6202 TAS
hsa RPS9 ribosomal protein S9 6203 TAS
hsa RPS10 ribosomal protein S10 6204 TAS
hsa RPS11 ribosomal protein S11 6205 TAS
hsa RPS12 ribosomal protein S12 6206 TAS
hsa RPS13 ribosomal protein S13 6207 TAS
hsa RPS14 ribosomal protein S14 6208 TAS
hsa RPS15 ribosomal protein S15 6209 TAS
hsa RPS15A ribosomal protein S15a 6210 TAS
hsa RPS16 ribosomal protein S16 6217 TAS
hsa RPS17 ribosomal protein S17 6218 TAS
hsa RPS18 ribosomal protein S18 6222 TAS
hsa RPS19 ribosomal protein S19 6223 TAS
hsa RPS20 ribosomal protein S20 6224 TAS
hsa RPS21 ribosomal protein S21 6227 TAS
hsa RPS23 ribosomal protein S23 6228 TAS
hsa RPS24 ribosomal protein S24 6229 TAS
hsa RPS25 ribosomal protein S25 6230 TAS
hsa RPS26 ribosomal protein S26 6231 TAS
hsa RPS27 ribosomal protein S27 6232 TAS
hsa RPS27A ribosomal protein S27a 6233 TAS
hsa RPS28 ribosomal protein S28 6234 TAS
hsa RPS29 ribosomal protein S29 6235 TAS
hsa SKIV2L Ski2 like RNA helicase 6499
hsa UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 7311 TAS
hsa RPL14 ribosomal protein L14 9045 TAS
hsa RPL23 ribosomal protein L23 9349 TAS
hsa DHX34 DExH-box helicase 34 9704 IBA
hsa EIF4A3 eukaryotic translation initiation factor 4A3 9775 IMP,TAS
hsa CTIF cap binding complex dependent translation initiation factor 9811 IMP
hsa SMG7 SMG7 nonsense mediated mRNA decay factor 9887 IBA,TAS
hsa RBM8A RNA binding motif protein 8A 9939 IMP,TAS
hsa RNPS1 RNA binding protein with serine rich domain 1 10921 IDA,IMP,TAS
hsa RPL35 ribosomal protein L35 11224 TAS
hsa CASC3 CASC3 exon junction complex subunit 22794 TAS
hsa NCBP2 nuclear cap binding protein subunit 2 22916 IDA,IMP,TAS
hsa SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase 23049 IDA,NAS,TAS
hsa SMG6 SMG6 nonsense mediated mRNA decay factor 23293 IBA,IMP,TAS
mmu Gspt1 G1 to S phase transition 1 14852 IEA
mmu Gspt2 G1 to S phase transition 2 14853 IEA
mmu Eif3e eukaryotic translation initiation factor 3, subunit E 16341 ISO
mmu Magoh mago homolog, exon junction complex core component 17149 ISO
mmu Pabpc1 poly(A) binding protein, cytoplasmic 1 18458 IEA
mmu Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) 19704 IBA,ISO
mmu Rnps1 RNA binding protein with serine rich domain 1 19826 ISO
mmu Exosc10 exosome component 10 50912 IEA
mmu Pnrc2 proline-rich nuclear receptor coactivator 2 52830 IBA,ISO
mmu Rbm8a RNA binding motif protein 8a 60365 ISO
mmu Magohb mago homolog B, exon junction complex core component 66441 ISO
mmu Ncbp2 nuclear cap binding protein subunit 2 68092 ISO
mmu Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast) 68134 IBA,ISO
mmu Dcp2 decapping mRNA 2 70640 IEA,IEA
mmu Dhx34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 71723 IBA
mmu Smg9 SMG9 nonsense mediated mRNA decay factor 71997 IBA,ISO
mmu Parn poly(A)-specific ribonuclease (deadenylation nuclease) 74108 IEA
mmu Smg8 SMG8 nonsense mediated mRNA decay factor 74133 IBA,ISO
mmu Dcp1a decapping mRNA 1A 75901 IEA
mmu Pym1 PYM homolog 1, exon junction complex associated factor 78428 ISO
mmu Smg6 SMG6 nonsense mediated mRNA decay factor 103677 IBA,ISO
mmu Skiv2l superkiller viralicidic activity 2-like (S. cerevisiae) 108077
mmu Casc3 cancer susceptibility candidate 3 192160 IEA
mmu Eif4a3 eukaryotic translation initiation factor 4A3 192170 ISO
mmu Etf1 eukaryotic translation termination factor 1 225363 IEA
mmu Smg7 SMG7 nonsense mediated mRNA decay factor 226517 IBA
mmu Helz2 helicase with zinc finger 2, transcriptional coactivator 229003 IBA
mmu Smg5 SMG5 nonsense mediated mRNA decay factor 229512 IBA
mmu Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase 233789 ISO
mmu Pnldc1 poly(A)-specific ribonuclease (PARN)-like domain containing 1 240023 IEA
mmu Ctif CBP80/20-dependent translation initiation factor 269037 ISO
mmu Dcp1b decapping mRNA 1B 319618 IEA
mmu Upf2 UPF2 regulator of nonsense transcripts homolog (yeast) 326622 IBA,ISO
mmu Ncbp1 nuclear cap binding protein subunit 1 433702 IBA,ISO
mmu Rbm8a2 RNA binding motif protein 8A2 545388 ISO
mmu Eif4a3l1 eukaryotic translation initiation factor 4A3 like 1 668137 ISO
rno Pabpc1 poly(A) binding protein, cytoplasmic 1 171350 IEA
rno Casc3 CASC3 exon junction complex subunit 259170 IEA
rno Rnps1 RNA binding protein with serine rich domain 1 287113 ISO
rno Smg6 SMG6 nonsense mediated mRNA decay factor 287522 IBA,ISO
rno Smg8 SMG8 nonsense mediated mRNA decay factor 287596 IBA,ISO
rno Dcp2 decapping mRNA 2 291604 IEA
rno Skiv2l Ski2 like RNA helicase 294260
rno Rbm8a RNA binding motif protein 8A 295284 ISO
rno Ncbp1 nuclear cap binding protein subunit 1 298075 IBA,ISO,ISS
rno Magoh mago homolog, exon junction complex subunit 298385 ISO
rno Eif3el1 eukaryotic translation initiation factor 3, subunit E-like 1 299872 ISS
rno Etf1 eukaryotic translation termination factor 1 307503 IEA
rno Upf3b UPF3B, regulator of nonsense mediated mRNA decay 313449 IBA,ISO
rno Parn poly(A)-specific ribonuclease 360464 IEA
rno Smg7 SMG7 nonsense mediated mRNA decay factor 360855 IBA
rno Dcp1a decapping mRNA 1A 361109 IEA
rno Upf3a UPF3A, regulator of nonsense mediated mRNA decay 361176 ISO
rno Upf2 UPF2, regulator of nonsense mediated mRNA decay 361271 IBA,ISO
rno Pnldc1 PARN like ribonuclease domain containing exonuclease 1 361478 IEA
rno Ctif cap binding complex dependent translation initiation factor 364900 ISO
rno Smg9 SMG9 nonsense mediated mRNA decay factor 365215 IBA,ISO,ISS
rno Pym1 PYM homolog 1, exon junction complex associated factor 366790 ISO
rno Dcp1b decapping mRNA 1B 500305 IEA
rno Smg5 SMG5 nonsense mediated mRNA decay factor 681012 IBA
rno Upf1 UPF1, RNA helicase and ATPase 684558 IBA,ISO
rno Dhx34 DExH-box helicase 34 684903 IBA
rno Eif4a3 eukaryotic translation initiation factor 4A3 688288 ISO
rno Ncbp2 nuclear cap binding protein subunit 2 689116 ISO
rno Magohb mago homolog B, exon junction complex subunit 690303 ISO
rno Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 691397 ISO
rno Pnrc2 proline-rich nuclear receptor coactivator 2 100125373 IBA,IEA,ISO,ISS
rno Eif3e eukaryotic translation initiation factor 3 subunit E 103692906 ISO
gga EIF4A3 eukaryotic translation initiation factor 4A3 416704 IEA
gga PNRC2 proline rich nuclear receptor coactivator 2 419688 IBA,ISS
gga LOC422214 nuclear cap binding protein subunit 2, 20kDa 422214 IEA
gga NCBP1 nuclear cap binding protein subunit 1 427379 IBA,ISS
dre ncbp2 nuclear cap binding protein subunit 2 192325 IEA
dre etf1b eukaryotic translation termination factor 1b 266989 IEA
dre dcp1a decapping mRNA 1A 360153 IEA
dre dcp2 decapping mRNA 2 393121 IEA
dre pym1 PYM homolog 1, exon junction complex associated factor 393566 IEA,ISS
dre upf3b UPF3B regulator of nonsense mediated mRNA decay 393929 IBA,IEA
dre eif4a3 eukaryotic translation initiation factor 4A3 394053 IEA
dre casc3 casc3 exon junction complex subunit 403025 IEA
dre upf1 UPF1 RNA helicase and ATPase 406783 IBA,IEA,IMP
dre rbm8a RNA binding motif protein 8A 503767 IEA
dre smg5 SMG5 nonsense mediated mRNA decay factor 553261 IBA,IEA
dre dhx34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 555838 IBA,IMP
dre nbas NBAS subunit of NRZ tethering complex 556592 IMP
dre skiv2l SKI2 homolog, superkiller viralicidic activity 2-like 559653
dre smg9 SMG9 nonsense mediated mRNA decay factor 562557 IBA,IEA
dre etf1a eukaryotic translation termination factor 1a 563172 IEA
dre pnrc2 proline-rich nuclear receptor coactivator 2 565522 IBA,IEA,ISS
dre smg7 SMG7 nonsense mediated mRNA decay factor 565575 IBA,IEA
dre upf3a UPF3A regulator of nonsense mediated mRNA decay 566608 IEA
dre smg8 SMG8 nonsense mediated mRNA decay factor 567424 IBA,IEA
dre dcp1b decapping mRNA 1B 568176 IEA
dre upf2 UPF2 regulator of nonsense mediated mRNA decay 569006 IEA
dre smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase 569810 IEA
dre magoh mago homolog, exon junction complex subunit 100005893 IEA
dre smg6 SMG6 nonsense mediated mRNA decay factor 100334020 IBA,IDA,IEA
dme nonC no-on-and-no-off transient C 31625 IDA,IMP,IMP
dme Upf2 Upf2 31724 IBA,IDA,IMP
dme Upf1 Upf1 RNA helicase 32153 IBA,IMP
dme CG8915 uncharacterized protein 32715 IBA
dme CG32533 uncharacterized protein 32933 IBA
dme pcm pacman 32935 IMP
dme CG6729 uncharacterized protein 34484 IBA,ISS
dme Smg5 Smg5 nonsense mediated mRNA decay factor 34804 IBA,IMP
dme Pym Partner of Y14 and Mago 37780 ISS
dme DCP1 Decapping protein 1 37790 IMP
dme Upf3 Upf3 37792 IBA,IMP
dme armi armitage 38427 IMP
dme DCP2 Decapping protein 2 39722 IMP
dme sqd squid 41666 TAS
dme CG7907 uncharacterized protein 42539 IBA
dme tst twister 42813
dme Smg6 Smg6 42994 IBA,IDA,IMP
dme gw gawky 43808 IMP
dme Cbp80 cap binding protein 80 44409 IBA
dme nompA no mechanoreceptor potential A 45587 IMP
dme CG3857 uncharacterized protein 2768908 IBA,ISS
cel smg-2 Regulator of nonsense transcripts 1 171696 IBA,IEA,IMP
cel ncbp-1 Nuclear cap-binding protein subunit 1 172345 IBA
cel smg-5 PINc domain-containing protein 172391 IMP
cel smg-1 Serine/threonine-protein kinase smg-1 172418 IEA,IMP
cel casc-3 Protein CASC3 173203 IEA
cel tiar-1 RRM domain-containing protein 173967 IBA
cel tiar-2 TIA-1/TIAL RNA binding protein homolog 174909 IBA
cel smg-8 Protein smg-8 175103 IBA,IEA,IMP
cel smg-9 Protein smg-9 175132 IBA,IEA,IMP,ISS
cel smg-6 PINc domain-containing protein 175367 IBA,IEA,IMP
cel dcap-1 mRNA_decap_C domain-containing protein 176924 IEA
cel smgl-2 Uncharacterized protein 177135 IBA
cel smg-3 Suppressor with Morphological effect on Genitalia 177397 IBA,IEA,IMP
cel smg-7 TPR_REGION domain-containing protein 177435 IBA,IEA,IMP
cel skih-2 uncharacterized protein 178017
cel smg-4 Smg4_UPF3 domain-containing protein 179371 IBA,IEA,IMP
sce RRP43 exosome non-catalytic core subunit RRP43 850401
sce NMD4 Nmd4p 851077 IEA,IPI
sce SKI2 SKI complex RNA helicase subunit SKI2 851114
sce RRP42 exosome non-catalytic core subunit RRP42 851447
sce EBS1 Ebs1p 851787 IMP
sce RRP45 exosome non-catalytic core subunit RRP45 851874
sce EDC1 Edc1p 852650 IEA
sce SKI8 SKI complex subunit WD repeat protein SKI8 852659
sce XRN1 chromatin-binding exonuclease XRN1 852702 IEA,IMP
sce UPF3 Upf3p 852963 IBA,IEA
sce RRP46 exosome non-catalytic core subunit RRP46 852987
sce MTR3 exosome non-catalytic core subunit MTR3 853062
sce SKI6 exosome non-catalytic core subunit SKI6 853109
sce FRE2 ferric/cupric-chelate reductase 853660 IDA
sce ESL2 Esl2p 853971 IBA
sce HRP1 Hrp1p 853997 IEA
sce DCP1 Dcp1p 854016 IEA
sce RRP40 exosome non-catalytic core subunit RRP40 854023
sce CDC33 translation initiation factor eIF4E 854026 IDA
sce DIS3 exosome catalytic subunit DIS3 854138
sce SKI7 Ski7p 854243 IEA
sce DCS2 5'-(N(7)-methyl 5'-triphosphoguanosine)-(mRNA) diphosphatase 854344 IEA
sce ESL1 Esl1p 854655 IBA
sce NAM7 ATP-dependent RNA helicase NAM7 855104 IBA,IEA,IMP
sce STO1 Sto1p 855155 IBA,IDA,IEA
sce CSL4 exosome non-catalytic core subunit CSL4 855489
sce DCP2 decapping enzyme complex catalytic subunit 855605 IEA
sce DBP2 DEAD-box ATP-dependent RNA helicase DBP2 855611 IEA,IPI
sce PUB1 Pub1p 855716 IBA,IDA
sce CBC2 nuclear cap-binding protein subunit CBC2 855925 IEA
sce SKI3 SKI complex subunit tetratricopeptide repeat protein SKI3 856319
sce RRP4 exosome non-catalytic core subunit RRP4 856466
sce NMD2 Nmd2p 856476 IBA,IEA,IMP
sce EDC2 Edc2p 856757 IEA
sce ECM32 RNA helicase 856923 IBA
spo SPCC550.03c putative Ski complex RNA helicase Ski2 2538841
spo SPCC757.08 putative exosome subunit Rrp45 2539106
spo SPCC1919.05 putative Ski complex TPR repeat subunit Ski3 2539136
spo csl4 putative exosome subunit Csl4 2539351
spo SPCC16C4.16c hypothetical protein 2539386 IC
spo rrp46 putative exosome subunit Rrp46 2539660
spo tif452 translation initiation factor eIF4E 4F complex subunit 2539870 ISO
spo SPBC16G5.10 putative exosome subunit Rrp42 2540116
spo SPBC17D1.03c putative exosome subunit Rrp43 2540189
spo rec14 Ski complex subunit Rec14 2540221
spo SPBC2F12.03c putative EST1 family protein 2540346 IGI
spo dis3 putative 3'-5' exoribonuclease subunit Dis3 2540398
spo SPBC211.08c exosome complex component mtr3 2540412
spo mni1 protein mni1 2540798 ISS
spo dbp2 ATP-dependent RNA helicase Dbp2 2541383 ISO
spo SPAP8A3.05 putative ski complex-interacting GTPase 2541693
spo tif45 translation initiation factor eIF4E tif45 2541706 ISO
spo SPAC2F7.14c putative exosome subunit Rrp4 2541813
spo SPAC22A12.12c putative exosome subunit Rrp40 2541837
spo mei2 RNA-binding protein Mei2 2542080 IMP
spo upf2 nonsense-mediated decay protein Upf2 2542147 IBA,IMP
spo exo2 exonuclease II Exo2 2542204 ISO
spo upf1 ATP-dependent RNA helicase Upf1 2542327 IBA
spo dcp2 mRNA-decapping complex catalytic subunit Dcp2 2542503 IEA
spo SPAC6G10.07 putative nuclear cap-binding complex large subunit 2542556 IBA,ISO
spo upf3 protein upf3 2542908 IBA
spo rrp41 putative exosome 3'-5' phosphorolytic exoribonuclease Rrp41 2543451


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